Insertion junction: LMJ.RY0402.039123_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.039123
Chromosome:chromosome 11
Location:3826361
Confidence (%):58
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCCTAAAACCCTAAAACCCTAAAGCCC
Internal bar code:TAGTTAGGTCGCTGTCAGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:18.5529
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:439
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACCCTAAAACCCTAAAACCC
Suggested primer 2:ATGGATGTGCAACCTGTCAA