Insertion junction: LMJ.RY0402.039238_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.039238
Chromosome:chromosome 12
Location:3471151
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g496250 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGGCCAGGAGCCTGCACGTGCGCTGTG
Internal bar code:AAAGCGGTCCGAATACACCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:98.9196
LEAP-Seq n confirming:12543
LEAP-Seq n nonconfirming:137
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTATCGTGTTGTGTGGC
Suggested primer 2:TCGCGATTCAGCTTTGTATG