Insertion junction: LMJ.RY0402.039286_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.039286
Chromosome:chromosome 9
Location:7102423
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g411751 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACGCGTCCATTTCGCAGCCACCGGGA
Internal bar code:TTAATGTCGTTCGTAAGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:99.2404
LEAP-Seq n confirming:2221
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAAGGTTGCATGGGTTG
Suggested primer 2:GTTGGGTTGGTTGCAAGTCT