Insertion junction: LMJ.RY0402.039333_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.039333
Chromosome:chromosome 13
Location:2409816
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCGACACGCGCGCGCGGTGTTTACCTGG
Internal bar code:CTTTCAGTCGCGAACGGCAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:264
LEAP-Seq percent confirming:74.7068
LEAP-Seq n confirming:1465
LEAP-Seq n nonconfirming:496
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCATAATGTTTGCGTCTT
Suggested primer 2:CACCCATATATCCATTCGGC