Insertion junction: LMJ.RY0402.039380_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.039380
Chromosome:chromosome 3
Location:8493044
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200655 DEG4 (1 of 1) 3.2.1.55 - Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase; DegP protease and Glycoside hydrolase family 3 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGCGTGCGCGTGCGCATTTGCCCCGCT
Internal bar code:CTCGATGGTAGGGGCGTCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:99.4268
LEAP-Seq n confirming:4510
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAACACCACTGACAACAC
Suggested primer 2:TACCACCCACCAGTCGTACA