Insertion junction: LMJ.RY0402.039380_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.039380
Chromosome:chromosome 3
Location:8493246
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200655 DEG4 (1 of 1) 3.2.1.55 - Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase; DegP protease and Glycoside hydrolase family 3 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGAAGGGCCGACGTGGGGCCGGGGGA
Internal bar code:GGGACATCGCACATGGGACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:33.5548
LEAP-Seq n confirming:606
LEAP-Seq n nonconfirming:1200
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAACACACACACAACACA
Suggested primer 2:GGGCAAACCACTCCTTAACA