Insertion junction: LMJ.RY0402.039418_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.039418
Chromosome:chromosome 7
Location:3450799
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g335400 EttA Putative soluble chloroplast ABCF protein, relatated to bacterial EttA which throttles translation speed; (1 of 1) PTHR19211:SF7 - ABC TRANSPORTER-RELATED PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTCTACGACGCGCGCATAGGCCTTCCC
Internal bar code:GCTGCATGTAGTCCTCTGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1316
LEAP-Seq percent confirming:99.8387
LEAP-Seq n confirming:1238
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCCTCCTTCCTCGTCTG
Suggested primer 2:AAGTCGGAGCCAAGTCTGAA