Insertion junction: LMJ.RY0402.039476_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.039476
Chromosome:chromosome 2
Location:5232121
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g106100 (1 of 1) IPR000104//IPR029058//IPR029059 - Antifreeze protein, type I // Alpha/Beta hydrolase fold // Alpha/beta hydrolase fold-5 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGTAGATGCAGAGTGCGCCTATGATGC
Internal bar code:AGGAGGTCGGGATCGCCCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:720
LEAP-Seq percent confirming:99.3663
LEAP-Seq n confirming:6586
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACATCAAACTTGCCAGC
Suggested primer 2:GAATAAGCTGCAGACAGGGC