Insertion junction: LMJ.RY0402.039548_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.039548
Chromosome:chromosome 5
Location:2274241
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g234666 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTACAGAAGCACCCATCAACACTCTTCCG
Internal bar code:GCCGTGCACCGACGGTAAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:845
LEAP-Seq percent confirming:99.6679
LEAP-Seq n confirming:3001
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGTTGGTGGTGATTCCG
Suggested primer 2:ATACCGTATCTCACGCGTCC