Insertion junction: LMJ.RY0402.039548_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.039548
Chromosome:chromosome 5
Location:2274246
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g234666 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCTGGTGCGCCGTGTTTGGTATGAGGGG
Internal bar code:TGCAACGGGGGAGTTTATGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:117
LEAP-Seq percent confirming:99.5146
LEAP-Seq n confirming:205
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCGTATCTCACGCGTCC
Suggested primer 2:AGAAGTTGGTGGTGATTCCG