Insertion junction: LMJ.RY0402.039549_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.039549
Chromosome:chromosome 3
Location:8216165
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g199800 HYD1,HYDA1 (1 of 2) 1.12.7.2 - Ferredoxin hydrogenase / Uptake hydrogenase; Iron hydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGGCGCAGCCACGACAGGAGAGGTGTG
Internal bar code:ATCGCACTGTTTATAAGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:663
LEAP-Seq percent confirming:99.734
LEAP-Seq n confirming:21369
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGAGGGATTGAGGAGAAT
Suggested primer 2:ACTGGCCTTGGATAATGCAC