Insertion junction: LMJ.RY0402.039556_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.039556
Chromosome:chromosome 1
Location:6335856
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g045200 (1 of 1) 5.3.99.6 - Allene-oxide cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGACACGCTGTCGGTGCCTGAATTTCTG
Internal bar code:CCCGGGCGGCGTGTGTGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:620
LEAP-Seq percent confirming:98.4506
LEAP-Seq n confirming:4829
LEAP-Seq n nonconfirming:76
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGCTGCTCAAAATTGCT
Suggested primer 2:CACGAGCGTTCCAGTAGTGA