Insertion junction: LMJ.RY0402.039572_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.039572
Chromosome:chromosome 16
Location:393864
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g693601 ISG-C2,ISG2 (1 of 5) PTHR16631//PTHR16631:SF9 - FAMILY NOT NAMED // GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCTGCCGAGTGGACAGCGTGCGCCGCA
Internal bar code:ACCGCTACGCGTGTGACAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:479
LEAP-Seq percent confirming:42.6523
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:160
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATTTCCCATGCTCCTTC
Suggested primer 2:AACAACAACTGCACCCCTTC