Insertion junction: LMJ.RY0402.039643_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.039643
Chromosome:chromosome 10
Location:5477019
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g458900 SRR33 (1 of 39) IPR001190 - SRCR domain; Scavenger receptor cysteine rich (SRCR) protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCATCGCCAGGACATCAGCACCCGACC
Internal bar code:AGCTCCTGCGCACTGGTTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:346
LEAP-Seq percent confirming:60.4102
LEAP-Seq n confirming:14110
LEAP-Seq n nonconfirming:9247
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCCGTTGACAACAATG
Suggested primer 2:AGAGCTGGGCACTCTCACAT