Insertion junction: LMJ.RY0402.039657_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.039657
Chromosome:chromosome 1
Location:1059162
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g006150 EFG9,PRFC1, PRFC1,PRF3 (1 of 1) PTHR23115//PTHR23115:SF69 - TRANSLATION FACTOR // PEPTIDE CHAIN RELEASE FACTOR 3; Putative chloroplast translation peptide-chain release factor 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCCCATTGCCTCACCATCCCTGTCCCC
Internal bar code:TATCTATGAACTATGAGCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:815
LEAP-Seq percent confirming:98.6639
LEAP-Seq n confirming:5169
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTCCACAGATATCCCCA
Suggested primer 2:CACACCACACCTCACCTCAC