Insertion junction: LMJ.RY0402.039677_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.039677
Chromosome:chromosome 12
Location:1037806
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g491150 VPS55 (1 of 1) PF04133 - Vacuolar protein sorting 55 (Vps55); Vacuolar trafficking protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAACAGCATACCACCCCCTACCACTCC
Internal bar code:TATTTCAATATGAGATGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:99.4104
LEAP-Seq n confirming:8262
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCACCAACCATTCACAT
Suggested primer 2:CGATTTCGCTCAGTGTTGAA