Insertion junction: LMJ.RY0402.039737_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.039737
Chromosome:chromosome 9
Location:2422348
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391500 ATG9 (1 of 1) K17907 - autophagy-related protein 9 (ATG9); Autophagy related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGCTGCAACAAAGCCTGCTTGCGAGG
Internal bar code:GTCGTCATCGATCTGCCGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:99.673
LEAP-Seq n confirming:9449
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCGTGTCCGTTACCGTT
Suggested primer 2:GCACCAACACATGCGTAATC