Insertion junction: LMJ.RY0402.039944_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.039944
Chromosome:chromosome 9
Location:3193323
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g387393 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGAATGAAAGCCATGTTCAATGTCGCCA
Internal bar code:CGTCTGGCAATTCGCGATAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:474
LEAP-Seq percent confirming:99.1605
LEAP-Seq n confirming:3898
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTAGTGCAAAGGTGCAG
Suggested primer 2:GTTGTGACGCAGTATGCCAC