Insertion junction: LMJ.RY0402.040065_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.040065
Chromosome:chromosome 1
Location:5965005
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g042402 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGTTTATTTGTTTACCTCGTCTGTGA
Internal bar code:TGGGTATGCGGCGTGTTCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:838
LEAP-Seq percent confirming:99.1706
LEAP-Seq n confirming:3826
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCCCTTCTAGTGTGCTG
Suggested primer 2:AGACGTCTAGACCCACCCCT