Insertion junction: LMJ.RY0402.040132_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.040132
Chromosome:chromosome 16
Location:4654921
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g687450 CPLD54 (1 of 1) PTHR16254//PTHR16254:SF6 - POTASSIUM/PROTON ANTIPORTER-RELATED // K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC; potassium ion transmembrane transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTAGGAAGTGGTAGACGGTGGGGAGGGA
Internal bar code:GGCAGTCATCACGCCCGATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:99.7155
LEAP-Seq n confirming:6659
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCTCAAGGGGAAAAGT
Suggested primer 2:AGCTCACCTCACCTCCCAC