Insertion junction: LMJ.RY0402.040215_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.040215
Chromosome:chromosome 5
Location:3145653
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g239300 (1 of 85) IPR009057 - Homeodomain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCATGTCTTGATCATTAATTCAATTAT
Internal bar code:CCGCGGCGGATGACCCGTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:400
LEAP-Seq percent confirming:96.5886
LEAP-Seq n confirming:1444
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGCAGAGCAGAGTTAGT
Suggested primer 2:TGATGGACTCCTCCTCCTTG