Insertion junction: LMJ.RY0402.040217_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.040217
Chromosome:chromosome 8
Location:1431942
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g364400 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTCGTTTGTGGGGCCTCAGGGCGCGG
Internal bar code:CATGGATACGGGTTGGCACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1011
LEAP-Seq percent confirming:97.7282
LEAP-Seq n confirming:9378
LEAP-Seq n nonconfirming:218
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGAAAGAATGGAGGGG
Suggested primer 2:CAGCCGATGCAGCTATTGTA