Insertion junction: LMJ.RY0402.040439_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.040439
Chromosome:chromosome 17
Location:3130523
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g721500 GBSS1A,STA2,GBBSI,GBS1 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein; Granule-bound starch synthase IA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCAGGAACCAGGGGTGGTCAATCCAC
Internal bar code:CACATGGCCTGTGGTTATGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1422
LEAP-Seq percent confirming:99.6835
LEAP-Seq n confirming:98269
LEAP-Seq n nonconfirming:312
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCCACTCTTAGCACGC
Suggested primer 2:AAGGCGATGTTGTGGATAGC