Insertion junction: LMJ.RY0402.040471_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.040471
Chromosome:chromosome 8
Location:2676567
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g373200 FXL7 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTCCACCTTGTTCAACTTCCCCGCGCG
Internal bar code:ACGAGGTGCGTTCAATGCGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:453
LEAP-Seq percent confirming:98.4513
LEAP-Seq n confirming:445
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTAGACTGTGGGATTGT
Suggested primer 2:GCTACTGGGCTACTCGATGC