Insertion junction: LMJ.RY0402.040485_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.040485
Chromosome:scaffold 36
Location:9406
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre36.g759647 (1 of 4) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTGCGTGGTAAATGGTTGTGATTAATA
Internal bar code:GAGTTACGGCGGTGCGAGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:504
LEAP-Seq percent confirming:99.3911
LEAP-Seq n confirming:2122
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CATTTGTCGTTGGTCAGGTG
Suggested primer 2:ATAGGGAGAATGGGGTACGG