Insertion junction: LMJ.RY0402.040588_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.040588
Chromosome:chromosome 5
Location:3047218
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g238761 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGCCACGCTGGCACGACAGGTATCCT
Internal bar code:TCGCCGGGGTGGAATCATCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:80.756
LEAP-Seq n confirming:2115
LEAP-Seq n nonconfirming:504
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAGTAGTAACGCCAGAG
Suggested primer 2:CCCACCTTGGAGGTCTTGTA