Insertion junction: LMJ.RY0402.040671_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.040671
Chromosome:chromosome 10
Location:3732631
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g446400 VPS4,KATL1,KAT3,KAT2 (1 of 1) PTHR23074//PTHR23074:SF78 - AAA ATPASE // KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2; Katanin like protein 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATCTGCGGCTCCCGCACTGACGCACA
Internal bar code:TTCCAGTCAGCCTGCGTTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:759
LEAP-Seq percent confirming:99.571
LEAP-Seq n confirming:13229
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCGCAAGAACCTAAAGC
Suggested primer 2:ATGGTGGACAACACTCCACA