Insertion junction: LMJ.RY0402.040678_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.040678
Chromosome:chromosome 16
Location:1132772
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGTGTAGTCAGGCATACCGGTAGCTGC
Internal bar code:GGGTGACTCCTCGATGGATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:981
LEAP-Seq percent confirming:99.2871
LEAP-Seq n confirming:13648
LEAP-Seq n nonconfirming:98
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCACTTCTCAGTGCCACA
Suggested primer 2:ACACAAGATTCGAGTTGGGG