Insertion junction: LMJ.RY0402.040693_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.040693
Chromosome:chromosome 12
Location:5610361
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g532050 (1 of 1) PF00069//PF04564//PF07714//PF12796 - Protein kinase domain (Pkinase) // U-box domain (U-box) // Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCAGGACTTGAGCAGAGGTCAGGGTGC
Internal bar code:TGTTACGGGGGATTTGGCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:479
LEAP-Seq percent confirming:98.548
LEAP-Seq n confirming:6176
LEAP-Seq n nonconfirming:91
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCATCACCATACCTCAA
Suggested primer 2:TCTGGTGTACGAGCTGATGC