Insertion junction: LMJ.RY0402.040809_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.040809
Chromosome:scaffold 19
Location:154732
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre19.g750947 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCTAAGGACGAGTCGCTCGCACTTTGA
Internal bar code:TCAATCCCGATCTGTGCTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:101
LEAP-Seq percent confirming:43.0954
LEAP-Seq n confirming:1473
LEAP-Seq n nonconfirming:1945
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGATGGTCTGGTCTGGT
Suggested primer 2:CATAGCAGGCCAGTCTGTCA