Insertion junction: LMJ.RY0402.040951_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.040951
Chromosome:chromosome 16
Location:5038748
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g684500 TNP43,CSB62 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGAGCCGCCCTGTCGGCGCGCGCCCG
Internal bar code:AGTGCATACGACGTACAAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:11
LEAP-Seq percent confirming:95.5466
LEAP-Seq n confirming:236
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCGTCATAAAGAGCCTG
Suggested primer 2:CAAACAAACTGGGAGGCAAT