Insertion junction: LMJ.RY0402.040987_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.040987
Chromosome:chromosome 1
Location:2746386
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g016250 MLO3,MLO4 (1 of 5) PF03094 - Mlo family (Mlo); MLO family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGCGAGACCCAAATGTGCAGCACGACG
Internal bar code:CGCAAAATTATACCTTTCACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:96.3265
LEAP-Seq n confirming:708
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCACAAGCTCTTATTGT
Suggested primer 2:AACGGCTTACAGTGGGATTG