Insertion junction: LMJ.RY0402.041080_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.041080
Chromosome:chromosome 6
Location:5241237
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g282251 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGGTACCCGAACAAAGCGAGCTAGCAA
Internal bar code:ATTTGATCATTGAGTACCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:534
LEAP-Seq percent confirming:94.7375
LEAP-Seq n confirming:14114
LEAP-Seq n nonconfirming:784
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTGTGTGTGTGTGTGT
Suggested primer 2:TTCACATCCCCGAAGAAGAC