Insertion junction: LMJ.RY0402.041232_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.041232
Chromosome:chromosome 6
Location:2954949
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g273050 CGLD10 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR35279//PTHR35279:SF1 - FAMILY NOT NAMED // ARABINANASE/LEVANSUCRASE/INVERTASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGTGGAGGGGCTGCGCATGCGGCCCGG
Internal bar code:CCAAGGGACGCTGAGCGCGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:793
LEAP-Seq percent confirming:98.0711
LEAP-Seq n confirming:1932
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGCCATCTGGAACAAAG
Suggested primer 2:CCCTTCTTGGTCCACTTGAA