Insertion junction: LMJ.RY0402.041282_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.041282
Chromosome:chromosome 12
Location:7419612
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g556700 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGGGCGAAACAGCGAGCGGAGCGCGCG
Internal bar code:TAGAGTGCCCAAGGAGGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:783
LEAP-Seq percent confirming:99.5775
LEAP-Seq n confirming:4007
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCAGTCACCTGTACCT
Suggested primer 2:GTTTGCGCCTAGAACAGAGG