Insertion junction: LMJ.RY0402.041400_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.041400
Chromosome:chromosome 3
Location:2006522
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g156000 (1 of 8) IPR014710 - RmlC-like jelly roll fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTTGGATTCTGAACTCATGGTTTGCTA
Internal bar code:ATACGTGTTCCTTGTGGTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:194
LEAP-Seq percent confirming:86.9048
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGAAACCTCCTGCAGTC
Suggested primer 2:AACCAAACCACCTTGTCTGC