Insertion junction: LMJ.RY0402.041494_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.041494
Chromosome:chromosome 16
Location:3127179
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAATTGGTCTGGCGACCGCGGTGCAGCT
Internal bar code:TCGGTCGTTTCGTCCCACGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:861
LEAP-Seq percent confirming:99.504
LEAP-Seq n confirming:1003
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGCACCACATACACGGA
Suggested primer 2:ACCACGTGCATTGTGTGATT