Insertion junction: LMJ.RY0402.041516_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.041516
Chromosome:chromosome 3
Location:3863801
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGAGTGCAATGCGTCGTTGCTTGATTT
Internal bar code:GTTGAATAGGGAGGATCCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:98.7372
LEAP-Seq n confirming:1251
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAAATGGAGCAACCCAG
Suggested primer 2:TCCGTCTGACGTCTGTCTTG