Insertion junction: LMJ.RY0402.041543_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.041543
Chromosome:chromosome 12
Location:5609372
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g532050 (1 of 1) PF00069//PF04564//PF07714//PF12796 - Protein kinase domain (Pkinase) // U-box domain (U-box) // Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACCGCCGCCAGGACCGCCCCGACCTCAG
Internal bar code:ATAACTGGCAGACATTGAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:893
LEAP-Seq percent confirming:99.8024
LEAP-Seq n confirming:12626
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGAGCCAGCAATACGATG
Suggested primer 2:TCGAGTACATGTGAGCTGGC