Insertion junction: LMJ.RY0402.041638_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.041638
Chromosome:chromosome 13
Location:3446364
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g587500 AOF8 (1 of 2) 1.3.5.5 - 15-cis-phytoene desaturase / Plant-type phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGGGCCGCCCTCGGTGGGATCCAGGC
Internal bar code:GGTCACGCTCTAAGGAAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:588
LEAP-Seq percent confirming:99.6855
LEAP-Seq n confirming:1268
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCACCCCCTTTGTAATGA
Suggested primer 2:CAGTGCGTTAGCGTGGTAGA