Insertion junction: LMJ.RY0402.041721_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.041721
Chromosome:chromosome 14
Location:1939054
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g621100 (1 of 1) IPR000104//IPR001810//IPR025886 - Antifreeze protein, type I // F-box domain // Phloem protein 2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCGGTCTCACAACCCGCCCTCGCACCC
Internal bar code:CCAAAATTGTGGGCCGCAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:88.5593
LEAP-Seq n confirming:418
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCGTGTCATTTGTGTGT
Suggested primer 2:CTGAAGAGCACACACGGAAA