Insertion junction: LMJ.RY0402.041742_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.041742
Chromosome:chromosome 7
Location:2431317
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g328900 CDPK3,CDPK9 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGCCCGGCTACCGGGCGCCTCAGCTCG
Internal bar code:ATACCCACATGTTGGTGGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:99.7497
LEAP-Seq n confirming:13152
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCTAGAGCAGGAGCTGA
Suggested primer 2:GCGTTGAAGGCATACCAAAT