Insertion junction: LMJ.RY0402.041832_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.041832
Chromosome:chromosome 3
Location:9039200
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g210401 (1 of 1) PTHR14614//PTHR14614:SF15 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCCTACTACACGGAGGCTGCATGCGTAT
Internal bar code:GGGGACGAAGTGAAACGTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:794
LEAP-Seq percent confirming:52.0534
LEAP-Seq n confirming:1014
LEAP-Seq n nonconfirming:934
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGGTACTTGAAGCCA
Suggested primer 2:TACTTAGTGGGCGGGATTTG