Insertion junction: LMJ.RY0402.041894_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.041894
Chromosome:chromosome 3
Location:392733
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGCAGACTGGTGTCAGTGCGTCCTATA
Internal bar code:GGGGGAGATCTTCTTGGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:53.2874
LEAP-Seq n confirming:1856
LEAP-Seq n nonconfirming:1627
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACACACGACCCACATCG
Suggested primer 2:GAATGTCCCTGCACAATCCT