Insertion junction: LMJ.RY0402.041896_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.041896
Chromosome:chromosome 13
Location:4795545
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g605100 PDE20 (1 of 1) PF00233//PF01590 - 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I) // GAF domain (GAF); 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTGCTGTCCGTATCACTGAGGCGGAT
Internal bar code:AGGACGCATCGTTGGTCTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:98.6301
LEAP-Seq n confirming:144
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGGTCATGGAGAACCAC
Suggested primer 2:TGGGGGTTTACATTCATGGT