Insertion junction: LMJ.RY0402.041908_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.041908
Chromosome:chromosome 2
Location:511880
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g076987 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCTAACAGCTTCAGTTTCAAGCTCATC
Internal bar code:TTCCGATGCCGTGGACTCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1151
LEAP-Seq percent confirming:99.5338
LEAP-Seq n confirming:1281
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGACCACTTCGATGTTT
Suggested primer 2:AAATAGTTGGTGGCCTGTCG