Insertion junction: LMJ.RY0402.041994_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.041994
Chromosome:chromosome 5
Location:2781134
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g237050 CGLD27 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR34214:SF3 - GB|AAC18972.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGCGCGGGGGCCAGTGTGGGGCCGCC
Internal bar code:GAACGACCAGTGGTGTGTTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:581
LEAP-Seq percent confirming:99.0202
LEAP-Seq n confirming:9096
LEAP-Seq n nonconfirming:90
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCCCTTGGCCATATTCC
Suggested primer 2:CTGGCTCGAAGGTCTGGTAG