Insertion junction: LMJ.RY0402.042145_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.042145
Chromosome:chromosome 9
Location:6124971
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g405150 PUS1 RNA pseudouridine synthase; (1 of 2) PTHR11142//PTHR11142:SF0 - PSEUDOURIDYLATE SYNTHASE // TRNA PSEUDOURIDINE SYNTHASE-LIKE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTTGATGGATCACTGCCGCTGCCTTGC
Internal bar code:TGCCGGCTAGTCCATCATTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:371
LEAP-Seq percent confirming:98.8185
LEAP-Seq n confirming:10204
LEAP-Seq n nonconfirming:122
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCGTGGTCTAAGCAGATT
Suggested primer 2:ATCCATCCACCCATCCAGTA