Insertion junction: LMJ.RY0402.042211_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.042211
Chromosome:chromosome 17
Location:3689540
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g726950 (1 of 1) PTHR11042//PTHR11042:SF102 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED // INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED PROTEIN KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCATCCCATGACCGGGGTCGGGGGGCCC
Internal bar code:ATACGAGCGGGATAACGACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:810
LEAP-Seq percent confirming:95.3421
LEAP-Seq n confirming:1658
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACGCAGCAAGAAAG
Suggested primer 2:GACTTTTGCTGCTGGGAGAC