Insertion junction: LMJ.RY0402.042227_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.042227
Chromosome:chromosome 12
Location:2176920
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g508644 HDG1 (1 of 1) PTHR11850//PTHR11850:SF132 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 11; BELL-related homeodomain protein 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGATTGTGCCATGCTACATACACCTACA
Internal bar code:TGGTTCAGTGCAGTAACCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1011
LEAP-Seq percent confirming:99.3575
LEAP-Seq n confirming:3402
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCTGTGGCTGCTACTGC
Suggested primer 2:ACTGGCAACCAAACAGCTTC